A magnetic dual glasses window structure includes a window blind, provided between two panes of glass, including tilt cords for supporting a plurality of slats and an operating system which includes a shaft attached to the tilt cords and a magnetic actuating device. The magnetic actuating device includes an actuating cord movably and encirclingly attaching to two end portions of the shaft, a pair of resilient elements attached to the actuating cord respectively for applying an urging force against the actuating cord, a magnetic seat connecting between the two resilient elements and positioned adjacent an inner surface of one of the panes of glass, and a magnetic slider positioned adjacent an outer surface of the pane of glass for magnetically driving the magnetic seat to move. Therefore, by sliding the magnetic slider, the actuating cord drives the shaft to rotate for controlling the tilt angle of each of the slats.